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Cluster: HRGMv2_1814_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1814_22 HRGMv2_1814_22_76 83902 84903 + GT52
TF HRGMv2_1814_22 HRGMv2_1814_22_77 85071 85661 + GerE
STP HRGMv2_1814_22 HRGMv2_1814_22_78 85661 87163 + HATPase_c | MASE1
TC HRGMv2_1814_22 HRGMv2_1814_22_79 87173 88501 + 2.A.1.4.4
TC HRGMv2_1814_22 HRGMv2_1814_22_80 88646 90037 + 2.A.1.4.1
pfam HRGMv2_1814_22 HRGMv2_1814_22_81 90081 90695 - Aldolase
pfam HRGMv2_1814_22 HRGMv2_1814_22_82 90682 91584 - DGOK
TC HRGMv2_1814_22 HRGMv2_1814_22_83 91639 92949 - 2.A.1.14.33
Gene ID: HRGMv2_1814_22_76
Type: CAZyme
Location: 83902 - 84903 (+)
Gene ID: HRGMv2_1814_22_77
Type: TF
Location: 85071 - 85661 (+)
Gene ID: HRGMv2_1814_22_78
Type: STP
Location: 85661 - 87163 (+)
Gene ID: HRGMv2_1814_22_79
Type: TC
Location: 87173 - 88501 (+)
Gene ID: HRGMv2_1814_22_80
Type: TC
Location: 88646 - 90037 (+)
Gene ID: HRGMv2_1814_22_81
Type: pfam
Location: 90081 - 90695 (-)
Gene ID: HRGMv2_1814_22_82
Type: pfam
Location: 90682 - 91584 (-)
Gene ID: HRGMv2_1814_22_83
Type: TC
Location: 91639 - 92949 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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