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Cluster: HRGMv2_1814_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_22 HRGMv2_1814_22_56 61731 63392 + 2.A.81.1.5
TF HRGMv2_1814_22 HRGMv2_1814_22_57 63389 64111 - GntR
TC HRGMv2_1814_22 HRGMv2_1814_22_58 64334 65953 + 4.A.1.1.10
CAZyme HRGMv2_1814_22 HRGMv2_1814_22_59 65950 67272 + GH4
TF HRGMv2_1814_22 HRGMv2_1814_22_60 67269 68270 - HTH_AraC | HTH_AraC
TC HRGMv2_1814_22 HRGMv2_1814_22_61 68309 70045 + 2.A.21.3.21
sulfatase HRGMv2_1814_22 HRGMv2_1814_22_62 70042 71535 + S1_43
TC HRGMv2_1814_22 HRGMv2_1814_22_63 71716 72063 + 9.B.51.1.1
Gene ID: HRGMv2_1814_22_56
Type: TC
Location: 61731 - 63392 (+)
Gene ID: HRGMv2_1814_22_57
Type: TF
Location: 63389 - 64111 (-)
Gene ID: HRGMv2_1814_22_58
Type: TC
Location: 64334 - 65953 (+)
Gene ID: HRGMv2_1814_22_59
Type: CAZyme
Location: 65950 - 67272 (+)
Gene ID: HRGMv2_1814_22_60
Type: TF
Location: 67269 - 68270 (-)
Gene ID: HRGMv2_1814_22_61
Type: TC
Location: 68309 - 70045 (+)
Gene ID: HRGMv2_1814_22_62
Type: sulfatase
Location: 70042 - 71535 (+)
Gene ID: HRGMv2_1814_22_63
Type: TC
Location: 71716 - 72063 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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