Cluster: HRGMv2_1814_CGC38
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1814_21 | HRGMv2_1814_21_384 | 441137 | 442426 | - | 2.A.40.1.1 |
| STP | HRGMv2_1814_21 | HRGMv2_1814_21_385 | 442514 | 443140 | - | Pribosyltran |
| CAZyme | HRGMv2_1814_21 | HRGMv2_1814_21_386 | 443324 | 444754 | - | GH1 |
Gene ID: HRGMv2_1814_21_384
Type: TC
Location: 441137 - 442426 (-)
Type: TC
Location: 441137 - 442426 (-)
Gene ID: HRGMv2_1814_21_385
Type: STP
Location: 442514 - 443140 (-)
Type: STP
Location: 442514 - 443140 (-)
Gene ID: HRGMv2_1814_21_386
Type: CAZyme
Location: 443324 - 444754 (-)
Type: CAZyme
Location: 443324 - 444754 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1814_21_386 | vegetarian > omnivore | 1.75198 | 0.01221 |