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Cluster: HRGMv2_1814_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_21 HRGMv2_1814_21_65 78543 80228 - 9.B.33.1.1
TF HRGMv2_1814_21 HRGMv2_1814_21_66 80451 81182 + MerR
NULL(UNKNOWN) HRGMv2_1814_21 HRGMv2_1814_21_67 81292 81399 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1814_21 HRGMv2_1814_21_68 81380 82111 - 3.A.1.12.15
TC HRGMv2_1814_21 HRGMv2_1814_21_69 82095 83045 - 3.A.1.12.15
TC HRGMv2_1814_21 HRGMv2_1814_21_70 83035 84192 - 3.A.1.12.15
TC HRGMv2_1814_21 HRGMv2_1814_21_71 84217 85134 - 3.A.1.12.15
CAZyme HRGMv2_1814_21 HRGMv2_1814_21_72 85336 87633 - GH3
Gene ID: HRGMv2_1814_21_65
Type: TC
Location: 78543 - 80228 (-)
Gene ID: HRGMv2_1814_21_66
Type: TF
Location: 80451 - 81182 (+)
Gene ID: HRGMv2_1814_21_67
Type:
Location: 81292 - 81399 (+)
Gene ID: HRGMv2_1814_21_68
Type: TC
Location: 81380 - 82111 (-)
Gene ID: HRGMv2_1814_21_69
Type: TC
Location: 82095 - 83045 (-)
Gene ID: HRGMv2_1814_21_70
Type: TC
Location: 83035 - 84192 (-)
Gene ID: HRGMv2_1814_21_71
Type: TC
Location: 84217 - 85134 (-)
Gene ID: HRGMv2_1814_21_72
Type: CAZyme
Location: 85336 - 87633 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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