Cluster: HRGMv2_1814_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_21 | HRGMv2_1814_21_3 | 3013 | 4233 | - | GT4 |
| pfam | HRGMv2_1814_21 | HRGMv2_1814_21_4 | 4230 | 5510 | - | PS_pyruv_trans |
| TC | HRGMv2_1814_21 | HRGMv2_1814_21_5 | 5620 | 7098 | - | 2.A.66.2.7 |
| TC | HRGMv2_1814_21 | HRGMv2_1814_21_6 | 7108 | 8502 | - | 9.B.18.1.1 |
| pfam | HRGMv2_1814_21 | HRGMv2_1814_21_7 | 8557 | 9927 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | HRGMv2_1814_21 | HRGMv2_1814_21_8 | 10076 | 11512 | - | NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix |
| CAZyme | HRGMv2_1814_21 | HRGMv2_1814_21_9 | 11516 | 12739 | - | GT4 |
Gene ID: HRGMv2_1814_21_3
Type: CAZyme
Location: 3013 - 4233 (-)
Type: CAZyme
Location: 3013 - 4233 (-)
Gene ID: HRGMv2_1814_21_4
Type: pfam
Location: 4230 - 5510 (-)
Type: pfam
Location: 4230 - 5510 (-)
Gene ID: HRGMv2_1814_21_5
Type: TC
Location: 5620 - 7098 (-)
Type: TC
Location: 5620 - 7098 (-)
Gene ID: HRGMv2_1814_21_6
Type: TC
Location: 7108 - 8502 (-)
Type: TC
Location: 7108 - 8502 (-)
Gene ID: HRGMv2_1814_21_7
Type: pfam
Location: 8557 - 9927 (-)
Type: pfam
Location: 8557 - 9927 (-)
Gene ID: HRGMv2_1814_21_8
Type: pfam
Location: 10076 - 11512 (-)
Type: pfam
Location: 10076 - 11512 (-)
Gene ID: HRGMv2_1814_21_9
Type: CAZyme
Location: 11516 - 12739 (-)
Type: CAZyme
Location: 11516 - 12739 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.