Cluster: HRGMv2_1814_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_17 | HRGMv2_1814_17_166 | 174440 | 176791 | - | GH63 |
| NULL(UNKNOWN) | HRGMv2_1814_17 | HRGMv2_1814_17_167 | 176808 | 177869 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1814_17 | HRGMv2_1814_17_168 | 177952 | 179385 | - | 2.A.3.7.4 |
| pfam | HRGMv2_1814_17 | HRGMv2_1814_17_169 | 179453 | 179902 | - | DUF386 |
| CAZyme | HRGMv2_1814_17 | HRGMv2_1814_17_170 | 179899 | 182991 | - | GH2 |
Gene ID: HRGMv2_1814_17_166
Type: CAZyme
Location: 174440 - 176791 (-)
Type: CAZyme
Location: 174440 - 176791 (-)
Gene ID: HRGMv2_1814_17_167
Type:
Location: 176808 - 177869 (-)
Type:
Location: 176808 - 177869 (-)
Gene ID: HRGMv2_1814_17_168
Type: TC
Location: 177952 - 179385 (-)
Type: TC
Location: 177952 - 179385 (-)
Gene ID: HRGMv2_1814_17_169
Type: pfam
Location: 179453 - 179902 (-)
Type: pfam
Location: 179453 - 179902 (-)
Gene ID: HRGMv2_1814_17_170
Type: CAZyme
Location: 179899 - 182991 (-)
Type: CAZyme
Location: 179899 - 182991 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.