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Cluster: HRGMv2_1814_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1814_16 HRGMv2_1814_16_266 307628 310168 + GT51
TC HRGMv2_1814_16 HRGMv2_1814_16_267 310519 312768 + 1.B.14.1.2
TC HRGMv2_1814_16 HRGMv2_1814_16_268 312817 313614 + 3.A.1.14.3
TC HRGMv2_1814_16 HRGMv2_1814_16_269 313614 314504 + 3.A.1.14.3
TC HRGMv2_1814_16 HRGMv2_1814_16_270 314501 316483 + 3.A.1.14.3
pfam HRGMv2_1814_16 HRGMv2_1814_16_271 316554 317834 - Aminotran_3
TC HRGMv2_1814_16 HRGMv2_1814_16_272 318005 319426 + 2.A.49.5.5
pfam HRGMv2_1814_16 HRGMv2_1814_16_273 319507 319851 + Fe-S_biosyn
TC HRGMv2_1814_16 HRGMv2_1814_16_274 319957 320580 - 1.A.62.2.2
TC HRGMv2_1814_16 HRGMv2_1814_16_275 320617 321417 - 3.A.1.13.1
Gene ID: HRGMv2_1814_16_266
Type: CAZyme
Location: 307628 - 310168 (+)
Gene ID: HRGMv2_1814_16_267
Type: TC
Location: 310519 - 312768 (+)
Gene ID: HRGMv2_1814_16_268
Type: TC
Location: 312817 - 313614 (+)
Gene ID: HRGMv2_1814_16_269
Type: TC
Location: 313614 - 314504 (+)
Gene ID: HRGMv2_1814_16_270
Type: TC
Location: 314501 - 316483 (+)
Gene ID: HRGMv2_1814_16_271
Type: pfam
Location: 316554 - 317834 (-)
Gene ID: HRGMv2_1814_16_272
Type: TC
Location: 318005 - 319426 (+)
Gene ID: HRGMv2_1814_16_273
Type: pfam
Location: 319507 - 319851 (+)
Gene ID: HRGMv2_1814_16_274
Type: TC
Location: 319957 - 320580 (-)
Gene ID: HRGMv2_1814_16_275
Type: TC
Location: 320617 - 321417 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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