Cluster: HRGMv2_1814_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1814_16 | HRGMv2_1814_16_204 | 237723 | 238805 | + | 9.B.146.1.6 |
| pfam | HRGMv2_1814_16 | HRGMv2_1814_16_205 | 238808 | 240124 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1814_16 | HRGMv2_1814_16_206 | 240124 | 241368 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_1814_16 | HRGMv2_1814_16_207 | 241365 | 242432 | + | GT28 |
Gene ID: HRGMv2_1814_16_204
Type: TC
Location: 237723 - 238805 (+)
Type: TC
Location: 237723 - 238805 (+)
Gene ID: HRGMv2_1814_16_205
Type: pfam
Location: 238808 - 240124 (+)
Type: pfam
Location: 238808 - 240124 (+)
Gene ID: HRGMv2_1814_16_206
Type: TC
Location: 240124 - 241368 (+)
Type: TC
Location: 240124 - 241368 (+)
Gene ID: HRGMv2_1814_16_207
Type: CAZyme
Location: 241365 - 242432 (+)
Type: CAZyme
Location: 241365 - 242432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.