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Cluster: HRGMv2_1814_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1814_13 HRGMv2_1814_13_44 43215 44702 + GH13_5
pfam HRGMv2_1814_13 HRGMv2_1814_13_45 44783 45196 - YedD
TC HRGMv2_1814_13 HRGMv2_1814_13_46 45383 46588 + 9.B.102.1.1
pfam HRGMv2_1814_13 HRGMv2_1814_13_47 46585 46818 + TusA
pfam HRGMv2_1814_13 HRGMv2_1814_13_48 46882 47196 - FliE
TC HRGMv2_1814_13 HRGMv2_1814_13_49 47413 49089 + 3.A.6.2.1
pfam HRGMv2_1814_13 HRGMv2_1814_13_50 49079 50077 + FliG_C | FliG_M | FliG_N
TC HRGMv2_1814_13 HRGMv2_1814_13_51 50070 50774 + 3.A.6.2.1
TC HRGMv2_1814_13 HRGMv2_1814_13_52 50774 52144 + 3.A.6.2.1
Gene ID: HRGMv2_1814_13_44
Type: CAZyme
Location: 43215 - 44702 (+)
Gene ID: HRGMv2_1814_13_45
Type: pfam
Location: 44783 - 45196 (-)
Gene ID: HRGMv2_1814_13_46
Type: TC
Location: 45383 - 46588 (+)
Gene ID: HRGMv2_1814_13_47
Type: pfam
Location: 46585 - 46818 (+)
Gene ID: HRGMv2_1814_13_48
Type: pfam
Location: 46882 - 47196 (-)
Gene ID: HRGMv2_1814_13_49
Type: TC
Location: 47413 - 49089 (+)
Gene ID: HRGMv2_1814_13_50
Type: pfam
Location: 49079 - 50077 (+)
Gene ID: HRGMv2_1814_13_51
Type: TC
Location: 50070 - 50774 (+)
Gene ID: HRGMv2_1814_13_52
Type: TC
Location: 50774 - 52144 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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