Cluster: HRGMv2_1814_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_13 | HRGMv2_1814_13_9 | 7919 | 9340 | - | GT20 |
| pfam | HRGMv2_1814_13 | HRGMv2_1814_13_10 | 9315 | 10118 | - | Trehalose_PPase |
| TC | HRGMv2_1814_13 | HRGMv2_1814_13_11 | 10284 | 11270 | - | 3.A.1.2.2 |
| TC | HRGMv2_1814_13 | HRGMv2_1814_13_12 | 11286 | 12800 | - | 3.A.1.2.2 |
| TC | HRGMv2_1814_13 | HRGMv2_1814_13_13 | 12915 | 13904 | - | 3.A.1.2.2 |
Gene ID: HRGMv2_1814_13_9
Type: CAZyme
Location: 7919 - 9340 (-)
Type: CAZyme
Location: 7919 - 9340 (-)
Gene ID: HRGMv2_1814_13_10
Type: pfam
Location: 9315 - 10118 (-)
Type: pfam
Location: 9315 - 10118 (-)
Gene ID: HRGMv2_1814_13_11
Type: TC
Location: 10284 - 11270 (-)
Type: TC
Location: 10284 - 11270 (-)
Gene ID: HRGMv2_1814_13_12
Type: TC
Location: 11286 - 12800 (-)
Type: TC
Location: 11286 - 12800 (-)
Gene ID: HRGMv2_1814_13_13
Type: TC
Location: 12915 - 13904 (-)
Type: TC
Location: 12915 - 13904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.