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Cluster: HRGMv2_1814_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_12 HRGMv2_1814_12_1 213 794 + 3.A.7.19.1
pfam HRGMv2_1814_12 HRGMv2_1814_12_2 898 2280 + TPP_enzyme_M | TPP_enzyme_C
pfam HRGMv2_1814_12 HRGMv2_1814_12_3 2596 3582 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC HRGMv2_1814_12 HRGMv2_1814_12_4 3622 4551 + 3.A.1.2.21
TC HRGMv2_1814_12 HRGMv2_1814_12_5 4606 6153 + 3.A.1.2.21
TC HRGMv2_1814_12 HRGMv2_1814_12_6 6165 7193 + 3.A.1.2.21
CAZyme HRGMv2_1814_12 HRGMv2_1814_12_7 7204 8337 + GH179
Gene ID: HRGMv2_1814_12_1
Type: TC
Location: 213 - 794 (+)
Gene ID: HRGMv2_1814_12_2
Type: pfam
Location: 898 - 2280 (+)
Gene ID: HRGMv2_1814_12_3
Type: pfam
Location: 2596 - 3582 (+)
Gene ID: HRGMv2_1814_12_4
Type: TC
Location: 3622 - 4551 (+)
Gene ID: HRGMv2_1814_12_5
Type: TC
Location: 4606 - 6153 (+)
Gene ID: HRGMv2_1814_12_6
Type: TC
Location: 6165 - 7193 (+)
Gene ID: HRGMv2_1814_12_7
Type: CAZyme
Location: 7204 - 8337 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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