Cluster: HRGMv2_1814_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_11 | HRGMv2_1814_11_101 | 105204 | 106523 | - | CBM50 |
| TC | HRGMv2_1814_11 | HRGMv2_1814_11_102 | 106539 | 107498 | - | 3.A.1.15.5 |
| TC | HRGMv2_1814_11 | HRGMv2_1814_11_103 | 107562 | 108317 | + | 3.A.1.15.5 |
| TC | HRGMv2_1814_11 | HRGMv2_1814_11_104 | 108314 | 109099 | + | 3.A.1.15.5 |
Gene ID: HRGMv2_1814_11_101
Type: CAZyme
Location: 105204 - 106523 (-)
Type: CAZyme
Location: 105204 - 106523 (-)
Gene ID: HRGMv2_1814_11_102
Type: TC
Location: 106539 - 107498 (-)
Type: TC
Location: 106539 - 107498 (-)
Gene ID: HRGMv2_1814_11_103
Type: TC
Location: 107562 - 108317 (+)
Type: TC
Location: 107562 - 108317 (+)
Gene ID: HRGMv2_1814_11_104
Type: TC
Location: 108314 - 109099 (+)
Type: TC
Location: 108314 - 109099 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.