Cluster: HRGMv2_1814_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1814_8 | HRGMv2_1814_8_130 | 142056 | 143165 | + | 2.A.45.2.5 |
| peptidase | HRGMv2_1814_8 | HRGMv2_1814_8_131 | 143246 | 144166 | - | C82.UPB |
| TC | HRGMv2_1814_8 | HRGMv2_1814_8_132 | 144385 | 145980 | + | 3.A.1.121.4 |
| CAZyme | HRGMv2_1814_8 | HRGMv2_1814_8_133 | 146072 | 148435 | - | GH31_2 |
| TC | HRGMv2_1814_8 | HRGMv2_1814_8_134 | 148453 | 149754 | - | 2.A.1.14.2 |
Gene ID: HRGMv2_1814_8_130
Type: TC
Location: 142056 - 143165 (+)
Type: TC
Location: 142056 - 143165 (+)
Gene ID: HRGMv2_1814_8_131
Type: peptidase
Location: 143246 - 144166 (-)
Type: peptidase
Location: 143246 - 144166 (-)
Gene ID: HRGMv2_1814_8_132
Type: TC
Location: 144385 - 145980 (+)
Type: TC
Location: 144385 - 145980 (+)
Gene ID: HRGMv2_1814_8_133
Type: CAZyme
Location: 146072 - 148435 (-)
Type: CAZyme
Location: 146072 - 148435 (-)
Gene ID: HRGMv2_1814_8_134
Type: TC
Location: 148453 - 149754 (-)
Type: TC
Location: 148453 - 149754 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1814_8_133 | vegetarian > omnivore | 1.07353 | 0.03303 |