Cluster: HRGMv2_1814_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_1 | HRGMv2_1814_1_130 | 139652 | 142150 | + | GT2 |
| pfam | HRGMv2_1814_1 | HRGMv2_1814_1_131 | 142275 | 142502 | + | DUF1375 |
| pfam | HRGMv2_1814_1 | HRGMv2_1814_1_132 | 142503 | 142877 | - | MsyB |
| TC | HRGMv2_1814_1 | HRGMv2_1814_1_133 | 142959 | 144179 | - | 2.A.1.2.20 |
Gene ID: HRGMv2_1814_1_130
Type: CAZyme
Location: 139652 - 142150 (+)
Type: CAZyme
Location: 139652 - 142150 (+)
Gene ID: HRGMv2_1814_1_131
Type: pfam
Location: 142275 - 142502 (+)
Type: pfam
Location: 142275 - 142502 (+)
Gene ID: HRGMv2_1814_1_132
Type: pfam
Location: 142503 - 142877 (-)
Type: pfam
Location: 142503 - 142877 (-)
Gene ID: HRGMv2_1814_1_133
Type: TC
Location: 142959 - 144179 (-)
Type: TC
Location: 142959 - 144179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1814_1_132 | vegetarian > omnivore | 2.85643 | 0.03303 |