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Cluster: HRGMv2_1813_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_3 HRGMv2_1813_3_177 175460 176239 - 3.A.1.14.11
TC HRGMv2_1813_3 HRGMv2_1813_3_178 176232 177230 - 3.A.1.14.11
TC HRGMv2_1813_3 HRGMv2_1813_3_179 177227 178267 - 3.A.1.14.11
CAZyme HRGMv2_1813_3 HRGMv2_1813_3_180 178455 180752 - GH3
TF HRGMv2_1813_3 HRGMv2_1813_3_181 180868 181797 - HTH_1
STP HRGMv2_1813_3 HRGMv2_1813_3_182 182063 183217 + Aminotran_1_2
TC HRGMv2_1813_3 HRGMv2_1813_3_183 183260 184039 + 3.A.1.3.1
Gene ID: HRGMv2_1813_3_177
Type: TC
Location: 175460 - 176239 (-)
Gene ID: HRGMv2_1813_3_178
Type: TC
Location: 176232 - 177230 (-)
Gene ID: HRGMv2_1813_3_179
Type: TC
Location: 177227 - 178267 (-)
Gene ID: HRGMv2_1813_3_180
Type: CAZyme
Location: 178455 - 180752 (-)
Gene ID: HRGMv2_1813_3_181
Type: TF
Location: 180868 - 181797 (-)
Gene ID: HRGMv2_1813_3_182
Type: STP
Location: 182063 - 183217 (+)
Gene ID: HRGMv2_1813_3_183
Type: TC
Location: 183260 - 184039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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