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Cluster: HRGMv2_1813_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_21 HRGMv2_1813_21_40 43189 43539 - 8.A.2.1.3
CAZyme HRGMv2_1813_21 HRGMv2_1813_21_41 43710 45308 + AA1
STP HRGMv2_1813_21 HRGMv2_1813_21_42 45408 45944 + Pribosyltran
TC HRGMv2_1813_21 HRGMv2_1813_21_43 45981 46637 - 2.A.53.3.8
TC HRGMv2_1813_21 HRGMv2_1813_21_44 46875 47798 + 3.A.1.105.17
TC HRGMv2_1813_21 HRGMv2_1813_21_45 47795 48565 + 3.A.1.105.17
CAZyme HRGMv2_1813_21 HRGMv2_1813_21_46 48855 50135 + CE4
Gene ID: HRGMv2_1813_21_40
Type: TC
Location: 43189 - 43539 (-)
Gene ID: HRGMv2_1813_21_41
Type: CAZyme
Location: 43710 - 45308 (+)
Gene ID: HRGMv2_1813_21_42
Type: STP
Location: 45408 - 45944 (+)
Gene ID: HRGMv2_1813_21_43
Type: TC
Location: 45981 - 46637 (-)
Gene ID: HRGMv2_1813_21_44
Type: TC
Location: 46875 - 47798 (+)
Gene ID: HRGMv2_1813_21_45
Type: TC
Location: 47795 - 48565 (+)
Gene ID: HRGMv2_1813_21_46
Type: CAZyme
Location: 48855 - 50135 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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