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Cluster: HRGMv2_1813_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_15 HRGMv2_1813_15_33 45604 47037 - 1.B.73.1.1
pfam HRGMv2_1813_15 HRGMv2_1813_15_34 47259 47666 + PsiE
TC HRGMv2_1813_15 HRGMv2_1813_15_35 47780 48670 - 3.A.1.1.1
TC HRGMv2_1813_15 HRGMv2_1813_15_36 48682 50259 - 3.A.1.1.1
TC HRGMv2_1813_15 HRGMv2_1813_15_37 50323 51516 - 3.A.1.1.1
CAZyme HRGMv2_1813_15 HRGMv2_1813_15_38 51875 52846 + GH13
TC HRGMv2_1813_15 HRGMv2_1813_15_39 52839 53948 + 3.A.1.1.1
TC HRGMv2_1813_15 HRGMv2_1813_15_40 53981 55273 + 1.B.3.1.1
Gene ID: HRGMv2_1813_15_33
Type: TC
Location: 45604 - 47037 (-)
Gene ID: HRGMv2_1813_15_34
Type: pfam
Location: 47259 - 47666 (+)
Gene ID: HRGMv2_1813_15_35
Type: TC
Location: 47780 - 48670 (-)
Gene ID: HRGMv2_1813_15_36
Type: TC
Location: 48682 - 50259 (-)
Gene ID: HRGMv2_1813_15_37
Type: TC
Location: 50323 - 51516 (-)
Gene ID: HRGMv2_1813_15_38
Type: CAZyme
Location: 51875 - 52846 (+)
Gene ID: HRGMv2_1813_15_39
Type: TC
Location: 52839 - 53948 (+)
Gene ID: HRGMv2_1813_15_40
Type: TC
Location: 53981 - 55273 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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