dbCAN Logo

Cluster: HRGMv2_1813_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_14 HRGMv2_1813_14_95 105996 107261 + 3.A.1.1.12
TC HRGMv2_1813_14 HRGMv2_1813_14_96 107295 108290 + 3.A.1.1.12
TC HRGMv2_1813_14 HRGMv2_1813_14_97 108287 109132 + 3.A.1.1.12
CAZyme HRGMv2_1813_14 HRGMv2_1813_14_98 109165 110526 + GH4
TC HRGMv2_1813_14 HRGMv2_1813_14_99 110591 111706 + 3.A.1.1.12
CAZyme HRGMv2_1813_14 HRGMv2_1813_14_100 111727 113421 + GH13_31
STP HRGMv2_1813_14 HRGMv2_1813_14_101 113732 115174 + GGDEF | MASE1
TC HRGMv2_1813_14 HRGMv2_1813_14_102 115289 115642 + 3.A.5.1.1
Gene ID: HRGMv2_1813_14_95
Type: TC
Location: 105996 - 107261 (+)
Gene ID: HRGMv2_1813_14_96
Type: TC
Location: 107295 - 108290 (+)
Gene ID: HRGMv2_1813_14_97
Type: TC
Location: 108287 - 109132 (+)
Gene ID: HRGMv2_1813_14_98
Type: CAZyme
Location: 109165 - 110526 (+)
Gene ID: HRGMv2_1813_14_99
Type: TC
Location: 110591 - 111706 (+)
Gene ID: HRGMv2_1813_14_100
Type: CAZyme
Location: 111727 - 113421 (+)
Gene ID: HRGMv2_1813_14_101
Type: STP
Location: 113732 - 115174 (+)
Gene ID: HRGMv2_1813_14_102
Type: TC
Location: 115289 - 115642 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List