Cluster: HRGMv2_1813_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1813
- CGC Family ID: CGCFAM_00038
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1813_10 | HRGMv2_1813_10_112 | 131717 | 133135 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_1813_10 | HRGMv2_1813_10_113 | 133268 | 134362 | - | GT4 |
| CAZyme | HRGMv2_1813_10 | HRGMv2_1813_10_114 | 134381 | 135433 | - | GT4 |
| CAZyme | HRGMv2_1813_10 | HRGMv2_1813_10_115 | 135472 | 136614 | - | GT4 |
Gene ID: HRGMv2_1813_10_112
Type: TC
Location: 131717 - 133135 (-)
Type: TC
Location: 131717 - 133135 (-)
Gene ID: HRGMv2_1813_10_113
Type: CAZyme
Location: 133268 - 134362 (-)
Type: CAZyme
Location: 133268 - 134362 (-)
Gene ID: HRGMv2_1813_10_114
Type: CAZyme
Location: 134381 - 135433 (-)
Type: CAZyme
Location: 134381 - 135433 (-)
Gene ID: HRGMv2_1813_10_115
Type: CAZyme
Location: 135472 - 136614 (-)
Type: CAZyme
Location: 135472 - 136614 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia_J
Species
Serratia_J liquefaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.