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Cluster: HRGMv2_1813_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_9 HRGMv2_1813_9_166 173707 174714 + 3.A.1.13.1
pfam HRGMv2_1813_9 HRGMv2_1813_9_167 174756 175307 + GSHPx
TC HRGMv2_1813_9 HRGMv2_1813_9_168 175328 176083 + 3.A.1.13.1
STP HRGMv2_1813_9 HRGMv2_1813_9_169 176484 177638 + Aminotran_1_2
CAZyme HRGMv2_1813_9 HRGMv2_1813_9_170 177625 178605 + GT2
pfam HRGMv2_1813_9 HRGMv2_1813_9_171 178602 180587 + Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam HRGMv2_1813_9 HRGMv2_1813_9_172 180584 181489 + Polysacc_deac_1
CAZyme HRGMv2_1813_9 HRGMv2_1813_9_173 181486 183150 + GT83
TC HRGMv2_1813_9 HRGMv2_1813_9_174 183147 183494 + 2.A.7.22.2
Gene ID: HRGMv2_1813_9_166
Type: TC
Location: 173707 - 174714 (+)
Gene ID: HRGMv2_1813_9_167
Type: pfam
Location: 174756 - 175307 (+)
Gene ID: HRGMv2_1813_9_168
Type: TC
Location: 175328 - 176083 (+)
Gene ID: HRGMv2_1813_9_169
Type: STP
Location: 176484 - 177638 (+)
Gene ID: HRGMv2_1813_9_170
Type: CAZyme
Location: 177625 - 178605 (+)
Gene ID: HRGMv2_1813_9_171
Type: pfam
Location: 178602 - 180587 (+)
Gene ID: HRGMv2_1813_9_172
Type: pfam
Location: 180584 - 181489 (+)
Gene ID: HRGMv2_1813_9_173
Type: CAZyme
Location: 181486 - 183150 (+)
Gene ID: HRGMv2_1813_9_174
Type: TC
Location: 183147 - 183494 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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