Cluster: HRGMv2_1813_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1813_9 | HRGMv2_1813_9_82 | 85733 | 87175 | - | GH32 |
| TC | HRGMv2_1813_9 | HRGMv2_1813_9_83 | 87172 | 88431 | - | 2.A.1.5.4 |
| TC | HRGMv2_1813_9 | HRGMv2_1813_9_84 | 88604 | 89914 | - | 2.A.1.6.4 |
Gene ID: HRGMv2_1813_9_82
Type: CAZyme
Location: 85733 - 87175 (-)
Type: CAZyme
Location: 85733 - 87175 (-)
Gene ID: HRGMv2_1813_9_83
Type: TC
Location: 87172 - 88431 (-)
Type: TC
Location: 87172 - 88431 (-)
Gene ID: HRGMv2_1813_9_84
Type: TC
Location: 88604 - 89914 (-)
Type: TC
Location: 88604 - 89914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia_J
Species
Serratia_J liquefaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.