Cluster: HRGMv2_1813_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1813_7 | HRGMv2_1813_7_150 | 159492 | 161675 | - | GH129 |
| TC | HRGMv2_1813_7 | HRGMv2_1813_7_151 | 162189 | 162887 | + | 9.B.20.1.1 |
| TC | HRGMv2_1813_7 | HRGMv2_1813_7_152 | 163087 | 165786 | + | 3.A.3.4.1 |
Gene ID: HRGMv2_1813_7_150
Type: CAZyme
Location: 159492 - 161675 (-)
Type: CAZyme
Location: 159492 - 161675 (-)
Gene ID: HRGMv2_1813_7_151
Type: TC
Location: 162189 - 162887 (+)
Type: TC
Location: 162189 - 162887 (+)
Gene ID: HRGMv2_1813_7_152
Type: TC
Location: 163087 - 165786 (+)
Type: TC
Location: 163087 - 165786 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia_J
Species
Serratia_J liquefaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.