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Cluster: HRGMv2_1813_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_7 HRGMv2_1813_7_19 20106 21050 + 3.A.1.5.37
TC HRGMv2_1813_7 HRGMv2_1813_7_20 21047 21937 + 3.A.1.5.38
TC HRGMv2_1813_7 HRGMv2_1813_7_21 21934 23610 + 3.A.1.5.23
pfam HRGMv2_1813_7 HRGMv2_1813_7_22 23600 24646 + Bac_luciferase
pfam HRGMv2_1813_7 HRGMv2_1813_7_23 24643 25761 + CMD
CAZyme HRGMv2_1813_7 HRGMv2_1813_7_24 26020 26928 + GT73
pfam HRGMv2_1813_7 HRGMv2_1813_7_25 26906 28081 + Wzy_C
CAZyme HRGMv2_1813_7 HRGMv2_1813_7_26 28062 29168 - GT9
Gene ID: HRGMv2_1813_7_19
Type: TC
Location: 20106 - 21050 (+)
Gene ID: HRGMv2_1813_7_20
Type: TC
Location: 21047 - 21937 (+)
Gene ID: HRGMv2_1813_7_21
Type: TC
Location: 21934 - 23610 (+)
Gene ID: HRGMv2_1813_7_22
Type: pfam
Location: 23600 - 24646 (+)
Gene ID: HRGMv2_1813_7_23
Type: pfam
Location: 24643 - 25761 (+)
Gene ID: HRGMv2_1813_7_24
Type: CAZyme
Location: 26020 - 26928 (+)
Gene ID: HRGMv2_1813_7_25
Type: pfam
Location: 26906 - 28081 (+)
Gene ID: HRGMv2_1813_7_26
Type: CAZyme
Location: 28062 - 29168 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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