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Cluster: HRGMv2_1813_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1813_6 HRGMv2_1813_6_192 186172 186477 + 4.A.3.2.9
TC HRGMv2_1813_6 HRGMv2_1813_6_193 186587 186913 + 4.A.3.2.9
CAZyme HRGMv2_1813_6 HRGMv2_1813_6_194 186906 188207 + GH4
TC HRGMv2_1813_6 HRGMv2_1813_6_195 188262 189623 + 4.A.3.2.2
pfam HRGMv2_1813_6 HRGMv2_1813_6_196 189856 191508 + Sulfatase | EptA_B_N
NULL(UNKNOWN) HRGMv2_1813_6 HRGMv2_1813_6_197 191576 191695 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1813_6 HRGMv2_1813_6_198 191971 193473 - 2.A.1.6.4
TC HRGMv2_1813_6 HRGMv2_1813_6_199 193881 195245 - 2.A.6.2.44
TC HRGMv2_1813_6 HRGMv2_1813_6_200 195249 197189 - 3.A.1.122.12
TC HRGMv2_1813_6 HRGMv2_1813_6_201 197186 198370 - 3.A.1.122.12
Gene ID: HRGMv2_1813_6_192
Type: TC
Location: 186172 - 186477 (+)
Gene ID: HRGMv2_1813_6_193
Type: TC
Location: 186587 - 186913 (+)
Gene ID: HRGMv2_1813_6_194
Type: CAZyme
Location: 186906 - 188207 (+)
Gene ID: HRGMv2_1813_6_195
Type: TC
Location: 188262 - 189623 (+)
Gene ID: HRGMv2_1813_6_196
Type: pfam
Location: 189856 - 191508 (+)
Gene ID: HRGMv2_1813_6_197
Type:
Location: 191576 - 191695 (-)
Gene ID: HRGMv2_1813_6_198
Type: TC
Location: 191971 - 193473 (-)
Gene ID: HRGMv2_1813_6_199
Type: TC
Location: 193881 - 195245 (-)
Gene ID: HRGMv2_1813_6_200
Type: TC
Location: 195249 - 197189 (-)
Gene ID: HRGMv2_1813_6_201
Type: TC
Location: 197186 - 198370 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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