Cluster: HRGMv2_1813_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1813
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1813_6 | HRGMv2_1813_6_82 | 93101 | 94561 | - | 2.A.38.1.6 |
| NULL(UNKNOWN) | HRGMv2_1813_6 | HRGMv2_1813_6_83 | 94701 | 95090 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1813_6 | HRGMv2_1813_6_84 | 95242 | 95841 | - | AA6 |
| TC | HRGMv2_1813_6 | HRGMv2_1813_6_85 | 95919 | 96536 | - | 2.A.76.1.3 |
Gene ID: HRGMv2_1813_6_82
Type: TC
Location: 93101 - 94561 (-)
Type: TC
Location: 93101 - 94561 (-)
Gene ID: HRGMv2_1813_6_83
Type:
Location: 94701 - 95090 (-)
Type:
Location: 94701 - 95090 (-)
Gene ID: HRGMv2_1813_6_84
Type: CAZyme
Location: 95242 - 95841 (-)
Type: CAZyme
Location: 95242 - 95841 (-)
Gene ID: HRGMv2_1813_6_85
Type: TC
Location: 95919 - 96536 (-)
Type: TC
Location: 95919 - 96536 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Serratia_J
Species
Serratia_J liquefaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.