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Cluster: HRGMv2_1806_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1806_7 HRGMv2_1806_7_16 13942 14394 - GH24
pfam HRGMv2_1806_7 HRGMv2_1806_7_17 14387 14983 - DUF2589
pfam HRGMv2_1806_7 HRGMv2_1806_7_18 15044 15670 - DUF2589
TC HRGMv2_1806_7 HRGMv2_1806_7_19 15805 16149 - 4.A.2.1.10
pfam HRGMv2_1806_7 HRGMv2_1806_7_20 16175 17062 - Radical_SAM | Fer4_12
pfam HRGMv2_1806_7 HRGMv2_1806_7_21 17028 19325 - Gly_radical | PFL-like
TC HRGMv2_1806_7 HRGMv2_1806_7_22 19396 19716 - 4.A.2.1.10
TC HRGMv2_1806_7 HRGMv2_1806_7_23 19738 20820 - 4.A.2.1.10
NULL(UNKNOWN) HRGMv2_1806_7 HRGMv2_1806_7_24 20931 21125 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1806_7 HRGMv2_1806_7_25 21158 23659 + 4.A.2.1.10
Gene ID: HRGMv2_1806_7_16
Type: CAZyme
Location: 13942 - 14394 (-)
Gene ID: HRGMv2_1806_7_17
Type: pfam
Location: 14387 - 14983 (-)
Gene ID: HRGMv2_1806_7_18
Type: pfam
Location: 15044 - 15670 (-)
Gene ID: HRGMv2_1806_7_19
Type: TC
Location: 15805 - 16149 (-)
Gene ID: HRGMv2_1806_7_20
Type: pfam
Location: 16175 - 17062 (-)
Gene ID: HRGMv2_1806_7_21
Type: pfam
Location: 17028 - 19325 (-)
Gene ID: HRGMv2_1806_7_22
Type: TC
Location: 19396 - 19716 (-)
Gene ID: HRGMv2_1806_7_23
Type: TC
Location: 19738 - 20820 (-)
Gene ID: HRGMv2_1806_7_24
Type:
Location: 20931 - 21125 (+)
Gene ID: HRGMv2_1806_7_25
Type: TC
Location: 21158 - 23659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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