Cluster: HRGMv2_1797_CGC61
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1797
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1797_16 | HRGMv2_1797_16_26 | 38915 | 39943 | - | CE9 |
| pfam | HRGMv2_1797_16 | HRGMv2_1797_16_27 | 39954 | 40694 | - | Glucosamine_iso |
| TC | HRGMv2_1797_16 | HRGMv2_1797_16_28 | 40738 | 42075 | - | 2.A.1.6.5 |
| TF | HRGMv2_1797_16 | HRGMv2_1797_16_29 | 42632 | 43570 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_1797_16 | HRGMv2_1797_16_30 | 43764 | 45224 | + | 2.A.35.1.6 |
| STP | HRGMv2_1797_16 | HRGMv2_1797_16_31 | 45347 | 46519 | + | Aminotran_1_2 |
| TC | HRGMv2_1797_16 | HRGMv2_1797_16_32 | 46674 | 47309 | + | 2.A.53.3.12 |
Gene ID: HRGMv2_1797_16_26
Type: CAZyme
Location: 38915 - 39943 (-)
Type: CAZyme
Location: 38915 - 39943 (-)
Gene ID: HRGMv2_1797_16_27
Type: pfam
Location: 39954 - 40694 (-)
Type: pfam
Location: 39954 - 40694 (-)
Gene ID: HRGMv2_1797_16_28
Type: TC
Location: 40738 - 42075 (-)
Type: TC
Location: 40738 - 42075 (-)
Gene ID: HRGMv2_1797_16_29
Type: TF
Location: 42632 - 43570 (+)
Type: TF
Location: 42632 - 43570 (+)
Gene ID: HRGMv2_1797_16_30
Type: TC
Location: 43764 - 45224 (+)
Type: TC
Location: 43764 - 45224 (+)
Gene ID: HRGMv2_1797_16_31
Type: STP
Location: 45347 - 46519 (+)
Type: STP
Location: 45347 - 46519 (+)
Gene ID: HRGMv2_1797_16_32
Type: TC
Location: 46674 - 47309 (+)
Type: TC
Location: 46674 - 47309 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter europaeus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.