dbCAN Logo

Cluster: HRGMv2_1797_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1797_1 HRGMv2_1797_1_434 474708 476078 - 3.A.6.2.1
TC HRGMv2_1797_1 HRGMv2_1797_1_435 476078 476785 - 3.A.6.2.1
pfam HRGMv2_1797_1 HRGMv2_1797_1_436 476778 477776 - FliG_C | FliG_M | FliG_N
TC HRGMv2_1797_1 HRGMv2_1797_1_437 477769 479451 - 3.A.6.2.1
pfam HRGMv2_1797_1 HRGMv2_1797_1_438 479668 479982 + FliE
pfam HRGMv2_1797_1 HRGMv2_1797_1_439 480037 480270 - TusA
TC HRGMv2_1797_1 HRGMv2_1797_1_440 480267 481472 - 9.B.102.1.1
pfam HRGMv2_1797_1 HRGMv2_1797_1_441 481658 482071 + YedD
CAZyme HRGMv2_1797_1 HRGMv2_1797_1_442 482112 483599 - GH13_5
Gene ID: HRGMv2_1797_1_434
Type: TC
Location: 474708 - 476078 (-)
Gene ID: HRGMv2_1797_1_435
Type: TC
Location: 476078 - 476785 (-)
Gene ID: HRGMv2_1797_1_436
Type: pfam
Location: 476778 - 477776 (-)
Gene ID: HRGMv2_1797_1_437
Type: TC
Location: 477769 - 479451 (-)
Gene ID: HRGMv2_1797_1_438
Type: pfam
Location: 479668 - 479982 (+)
Gene ID: HRGMv2_1797_1_439
Type: pfam
Location: 480037 - 480270 (-)
Gene ID: HRGMv2_1797_1_440
Type: TC
Location: 480267 - 481472 (-)
Gene ID: HRGMv2_1797_1_441
Type: pfam
Location: 481658 - 482071 (+)
Gene ID: HRGMv2_1797_1_442
Type: CAZyme
Location: 482112 - 483599 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List