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Cluster: HRGMv2_1797_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1797_15 HRGMv2_1797_15_15 18421 18777 - 4.A.2.1.10
pfam HRGMv2_1797_15 HRGMv2_1797_15_16 18779 19657 - Radical_SAM | Fer4_12
pfam HRGMv2_1797_15 HRGMv2_1797_15_17 19623 21920 - Gly_radical | PFL-like
TC HRGMv2_1797_15 HRGMv2_1797_15_18 22022 22342 - 4.A.2.1.10
TC HRGMv2_1797_15 HRGMv2_1797_15_19 22357 23436 - 4.A.2.1.10
TC HRGMv2_1797_15 HRGMv2_1797_15_20 23745 26246 + 4.A.2.1.10
pfam HRGMv2_1797_15 HRGMv2_1797_15_21 26262 26924 + TAL_FSA
pfam HRGMv2_1797_15 HRGMv2_1797_15_22 26937 28040 + Fe-ADH | Fe-ADH_2
CAZyme HRGMv2_1797_15 HRGMv2_1797_15_23 28127 30307 - AA2
Gene ID: HRGMv2_1797_15_15
Type: TC
Location: 18421 - 18777 (-)
Gene ID: HRGMv2_1797_15_16
Type: pfam
Location: 18779 - 19657 (-)
Gene ID: HRGMv2_1797_15_17
Type: pfam
Location: 19623 - 21920 (-)
Gene ID: HRGMv2_1797_15_18
Type: TC
Location: 22022 - 22342 (-)
Gene ID: HRGMv2_1797_15_19
Type: TC
Location: 22357 - 23436 (-)
Gene ID: HRGMv2_1797_15_20
Type: TC
Location: 23745 - 26246 (+)
Gene ID: HRGMv2_1797_15_21
Type: pfam
Location: 26262 - 26924 (+)
Gene ID: HRGMv2_1797_15_22
Type: pfam
Location: 26937 - 28040 (+)
Gene ID: HRGMv2_1797_15_23
Type: CAZyme
Location: 28127 - 30307 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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