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Cluster: HRGMv2_1797_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1797_14 HRGMv2_1797_14_70 77403 79121 + GH37
STP HRGMv2_1797_14 HRGMv2_1797_14_71 79330 80352 + Peripla_BP_2
TC HRGMv2_1797_14 HRGMv2_1797_14_72 80352 81338 + 3.A.1.14.11
TC HRGMv2_1797_14 HRGMv2_1797_14_73 81335 82096 + 3.A.1.14.11
pfam HRGMv2_1797_14 HRGMv2_1797_14_74 82106 82918 + Methyltransf_11 | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_1797_14 HRGMv2_1797_14_75 82915 83772 + QRPTase_C | QRPTase_N
TC HRGMv2_1797_14 HRGMv2_1797_14_76 83795 85765 + 1.B.14.4.3
TC HRGMv2_1797_14 HRGMv2_1797_14_77 86328 86582 - 1.E.43.1.1
pfam HRGMv2_1797_14 HRGMv2_1797_14_78 86784 87518 + PilZ | PilZN
CAZyme HRGMv2_1797_14 HRGMv2_1797_14_79 87530 88141 - GH23
peptidase HRGMv2_1797_14 HRGMv2_1797_14_80 88240 89154 + S66.UPW
TC HRGMv2_1797_14 HRGMv2_1797_14_81 89252 90985 + 2.A.36.6.11
Gene ID: HRGMv2_1797_14_70
Type: CAZyme
Location: 77403 - 79121 (+)
Gene ID: HRGMv2_1797_14_71
Type: STP
Location: 79330 - 80352 (+)
Gene ID: HRGMv2_1797_14_72
Type: TC
Location: 80352 - 81338 (+)
Gene ID: HRGMv2_1797_14_73
Type: TC
Location: 81335 - 82096 (+)
Gene ID: HRGMv2_1797_14_74
Type: pfam
Location: 82106 - 82918 (+)
Gene ID: HRGMv2_1797_14_75
Type: pfam
Location: 82915 - 83772 (+)
Gene ID: HRGMv2_1797_14_76
Type: TC
Location: 83795 - 85765 (+)
Gene ID: HRGMv2_1797_14_77
Type: TC
Location: 86328 - 86582 (-)
Gene ID: HRGMv2_1797_14_78
Type: pfam
Location: 86784 - 87518 (+)
Gene ID: HRGMv2_1797_14_79
Type: CAZyme
Location: 87530 - 88141 (-)
Gene ID: HRGMv2_1797_14_80
Type: peptidase
Location: 88240 - 89154 (+)
Gene ID: HRGMv2_1797_14_81
Type: TC
Location: 89252 - 90985 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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