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Cluster: HRGMv2_1797_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1797_13 HRGMv2_1797_13_37 36480 38930 - GT35
NULL(UNKNOWN) HRGMv2_1797_13 HRGMv2_1797_13_38 38983 39180 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1797_13 HRGMv2_1797_13_39 39400 40707 + UPF0004 | Radical_SAM | TRAM_2
TC HRGMv2_1797_13 HRGMv2_1797_13_40 40801 41712 - 3.A.1.5.11
TC HRGMv2_1797_13 HRGMv2_1797_13_41 41715 42635 - 3.A.1.5.11
TC HRGMv2_1797_13 HRGMv2_1797_13_42 42682 44220 - 3.A.1.5.11
TC HRGMv2_1797_13 HRGMv2_1797_13_43 44249 46120 - 3.A.1.5.11
Gene ID: HRGMv2_1797_13_37
Type: CAZyme
Location: 36480 - 38930 (-)
Gene ID: HRGMv2_1797_13_38
Type:
Location: 38983 - 39180 (-)
Gene ID: HRGMv2_1797_13_39
Type: pfam
Location: 39400 - 40707 (+)
Gene ID: HRGMv2_1797_13_40
Type: TC
Location: 40801 - 41712 (-)
Gene ID: HRGMv2_1797_13_41
Type: TC
Location: 41715 - 42635 (-)
Gene ID: HRGMv2_1797_13_42
Type: TC
Location: 42682 - 44220 (-)
Gene ID: HRGMv2_1797_13_43
Type: TC
Location: 44249 - 46120 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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