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Cluster: HRGMv2_1797_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1797_5 HRGMv2_1797_5_334 356724 357629 - 1.B.21.1.1
TC HRGMv2_1797_5 HRGMv2_1797_5_335 357698 358780 - 3.A.1.1.46
pfam HRGMv2_1797_5 HRGMv2_1797_5_336 358791 359459 - Hydrolase | HAD_2
CAZyme HRGMv2_1797_5 HRGMv2_1797_5_337 359456 361732 - GH65
CAZyme HRGMv2_1797_5 HRGMv2_1797_5_338 361729 362784 - GH179
pfam HRGMv2_1797_5 HRGMv2_1797_5_339 362795 363583 - AP_endonuc_2
pfam HRGMv2_1797_5 HRGMv2_1797_5_340 363600 364652 - ADH_zinc_N
TC HRGMv2_1797_5 HRGMv2_1797_5_341 364680 365522 - 3.A.1.1.46
TC HRGMv2_1797_5 HRGMv2_1797_5_342 365509 366360 - 3.A.1.1.46
TC HRGMv2_1797_5 HRGMv2_1797_5_343 366411 367703 - 3.A.1.1.46
CAZyme HRGMv2_1797_5 HRGMv2_1797_5_344 367720 369426 - GH13_18
Gene ID: HRGMv2_1797_5_334
Type: TC
Location: 356724 - 357629 (-)
Gene ID: HRGMv2_1797_5_335
Type: TC
Location: 357698 - 358780 (-)
Gene ID: HRGMv2_1797_5_336
Type: pfam
Location: 358791 - 359459 (-)
Gene ID: HRGMv2_1797_5_337
Type: CAZyme
Location: 359456 - 361732 (-)
Gene ID: HRGMv2_1797_5_338
Type: CAZyme
Location: 361729 - 362784 (-)
Gene ID: HRGMv2_1797_5_339
Type: pfam
Location: 362795 - 363583 (-)
Gene ID: HRGMv2_1797_5_340
Type: pfam
Location: 363600 - 364652 (-)
Gene ID: HRGMv2_1797_5_341
Type: TC
Location: 364680 - 365522 (-)
Gene ID: HRGMv2_1797_5_342
Type: TC
Location: 365509 - 366360 (-)
Gene ID: HRGMv2_1797_5_343
Type: TC
Location: 366411 - 367703 (-)
Gene ID: HRGMv2_1797_5_344
Type: CAZyme
Location: 367720 - 369426 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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