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Cluster: HRGMv2_1797_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1797_1 HRGMv2_1797_1_118 132968 133357 - 2.A.7.22.1
TC HRGMv2_1797_1 HRGMv2_1797_1_119 133357 133692 - 2.A.7.22.2
CAZyme HRGMv2_1797_1 HRGMv2_1797_1_120 133689 135347 - GT83
pfam HRGMv2_1797_1 HRGMv2_1797_1_121 135344 136246 - Polysacc_deac_1
pfam HRGMv2_1797_1 HRGMv2_1797_1_122 136243 138225 - Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme HRGMv2_1797_1 HRGMv2_1797_1_123 138222 139205 - GT2
STP HRGMv2_1797_1 HRGMv2_1797_1_124 139208 140347 - Aminotran_1_2
STP HRGMv2_1797_1 HRGMv2_1797_1_125 140630 141055 - NUDIX
TC HRGMv2_1797_1 HRGMv2_1797_1_126 141373 141915 + 1.B.68.1.1
Gene ID: HRGMv2_1797_1_118
Type: TC
Location: 132968 - 133357 (-)
Gene ID: HRGMv2_1797_1_119
Type: TC
Location: 133357 - 133692 (-)
Gene ID: HRGMv2_1797_1_120
Type: CAZyme
Location: 133689 - 135347 (-)
Gene ID: HRGMv2_1797_1_121
Type: pfam
Location: 135344 - 136246 (-)
Gene ID: HRGMv2_1797_1_122
Type: pfam
Location: 136243 - 138225 (-)
Gene ID: HRGMv2_1797_1_123
Type: CAZyme
Location: 138222 - 139205 (-)
Gene ID: HRGMv2_1797_1_124
Type: STP
Location: 139208 - 140347 (-)
Gene ID: HRGMv2_1797_1_125
Type: STP
Location: 140630 - 141055 (-)
Gene ID: HRGMv2_1797_1_126
Type: TC
Location: 141373 - 141915 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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