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Cluster: HRGMv2_1797_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1797_3 HRGMv2_1797_3_59 69870 70589 + GT51
TC HRGMv2_1797_3 HRGMv2_1797_3_60 70656 70928 - 8.A.8.1.5
pfam HRGMv2_1797_3 HRGMv2_1797_3_61 70925 71779 - RapZ-like_N | PapZ_C
TC HRGMv2_1797_3 HRGMv2_1797_3_62 71825 72316 - 4.A.2.1.7
pfam HRGMv2_1797_3 HRGMv2_1797_3_63 72400 72687 - Ribosomal_S30AE
pfam HRGMv2_1797_3 HRGMv2_1797_3_64 72710 74143 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC HRGMv2_1797_3 HRGMv2_1797_3_65 74190 74915 - 1.B.42.1.2
TC HRGMv2_1797_3 HRGMv2_1797_3_66 74922 75470 - 1.B.42.1.2
TC HRGMv2_1797_3 HRGMv2_1797_3_67 75439 76014 - 1.B.42.1.2
pfam HRGMv2_1797_3 HRGMv2_1797_3_68 76011 76577 - Hydrolase_3
STP HRGMv2_1797_3 HRGMv2_1797_3_69 76598 77584 - CBS | CBS | SIS
TC HRGMv2_1797_3 HRGMv2_1797_3_70 77598 78575 - 2.A.19.5.1
TC HRGMv2_1797_3 HRGMv2_1797_3_71 78790 79602 + 3.A.1.27.3
TC HRGMv2_1797_3 HRGMv2_1797_3_72 79610 80392 + 3.A.1.27.3
TC HRGMv2_1797_3 HRGMv2_1797_3_73 80397 80954 + 3.A.1.27.3
TC HRGMv2_1797_3 HRGMv2_1797_3_74 80973 81608 + 3.A.1.27.3
TC HRGMv2_1797_3 HRGMv2_1797_3_75 81608 81901 + 3.A.1.27.3
Gene ID: HRGMv2_1797_3_59
Type: CAZyme
Location: 69870 - 70589 (+)
Gene ID: HRGMv2_1797_3_60
Type: TC
Location: 70656 - 70928 (-)
Gene ID: HRGMv2_1797_3_61
Type: pfam
Location: 70925 - 71779 (-)
Gene ID: HRGMv2_1797_3_62
Type: TC
Location: 71825 - 72316 (-)
Gene ID: HRGMv2_1797_3_63
Type: pfam
Location: 72400 - 72687 (-)
Gene ID: HRGMv2_1797_3_64
Type: pfam
Location: 72710 - 74143 (-)
Gene ID: HRGMv2_1797_3_65
Type: TC
Location: 74190 - 74915 (-)
Gene ID: HRGMv2_1797_3_66
Type: TC
Location: 74922 - 75470 (-)
Gene ID: HRGMv2_1797_3_67
Type: TC
Location: 75439 - 76014 (-)
Gene ID: HRGMv2_1797_3_68
Type: pfam
Location: 76011 - 76577 (-)
Gene ID: HRGMv2_1797_3_69
Type: STP
Location: 76598 - 77584 (-)
Gene ID: HRGMv2_1797_3_70
Type: TC
Location: 77598 - 78575 (-)
Gene ID: HRGMv2_1797_3_71
Type: TC
Location: 78790 - 79602 (+)
Gene ID: HRGMv2_1797_3_72
Type: TC
Location: 79610 - 80392 (+)
Gene ID: HRGMv2_1797_3_73
Type: TC
Location: 80397 - 80954 (+)
Gene ID: HRGMv2_1797_3_74
Type: TC
Location: 80973 - 81608 (+)
Gene ID: HRGMv2_1797_3_75
Type: TC
Location: 81608 - 81901 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1797_3_74 vegetarian > vegan 1.00504 0.02553

🧭 Explore Read Mapping of CGC

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