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Cluster: HRGMv2_1797_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1797_1 HRGMv2_1797_1_64 74044 75465 + 2.A.3.7.7
pfam HRGMv2_1797_1 HRGMv2_1797_1_65 75467 76570 + Ala_racemase_N
TC HRGMv2_1797_1 HRGMv2_1797_1_66 76637 78022 + 2.A.3.1.11
CAZyme HRGMv2_1797_1 HRGMv2_1797_1_67 78057 80018 - GH127
TC HRGMv2_1797_1 HRGMv2_1797_1_68 80026 81429 - 2.A.2.3.4
TF HRGMv2_1797_1 HRGMv2_1797_1_69 81769 82782 + LacI
pfam HRGMv2_1797_1 HRGMv2_1797_1_70 82823 83392 + Flavoprotein
TC HRGMv2_1797_1 HRGMv2_1797_1_71 83680 84462 + 3.A.1.3.1
TC HRGMv2_1797_1 HRGMv2_1797_1_72 84710 85492 + 3.A.1.3.29
TC HRGMv2_1797_1 HRGMv2_1797_1_73 85680 86366 + 3.A.1.3.1
TC HRGMv2_1797_1 HRGMv2_1797_1_74 86363 87070 + 3.A.1.3.1
TC HRGMv2_1797_1 HRGMv2_1797_1_75 87084 87857 + 3.A.1.3.29
Gene ID: HRGMv2_1797_1_64
Type: TC
Location: 74044 - 75465 (+)
Gene ID: HRGMv2_1797_1_65
Type: pfam
Location: 75467 - 76570 (+)
Gene ID: HRGMv2_1797_1_66
Type: TC
Location: 76637 - 78022 (+)
Gene ID: HRGMv2_1797_1_67
Type: CAZyme
Location: 78057 - 80018 (-)
Gene ID: HRGMv2_1797_1_68
Type: TC
Location: 80026 - 81429 (-)
Gene ID: HRGMv2_1797_1_69
Type: TF
Location: 81769 - 82782 (+)
Gene ID: HRGMv2_1797_1_70
Type: pfam
Location: 82823 - 83392 (+)
Gene ID: HRGMv2_1797_1_71
Type: TC
Location: 83680 - 84462 (+)
Gene ID: HRGMv2_1797_1_72
Type: TC
Location: 84710 - 85492 (+)
Gene ID: HRGMv2_1797_1_73
Type: TC
Location: 85680 - 86366 (+)
Gene ID: HRGMv2_1797_1_74
Type: TC
Location: 86363 - 87070 (+)
Gene ID: HRGMv2_1797_1_75
Type: TC
Location: 87084 - 87857 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1797_1_75 vegan > omnivore 1.92946 0.00229
HRGMv2_1797_1_75 vegetarian > omnivore 1.43009 0.00455

🧭 Explore Read Mapping of CGC

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