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Cluster: HRGMv2_1796_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1796_23 HRGMv2_1796_23_365 382434 382976 - 1.B.68.1.1
STP HRGMv2_1796_23 HRGMv2_1796_23_366 383295 383720 + NUDIX
STP HRGMv2_1796_23 HRGMv2_1796_23_367 384011 385150 + Aminotran_1_2
CAZyme HRGMv2_1796_23 HRGMv2_1796_23_368 385153 386136 + GT2
pfam HRGMv2_1796_23 HRGMv2_1796_23_369 386133 388115 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam HRGMv2_1796_23 HRGMv2_1796_23_370 388112 389014 + Polysacc_deac_1
CAZyme HRGMv2_1796_23 HRGMv2_1796_23_371 389011 390669 + GT83
TC HRGMv2_1796_23 HRGMv2_1796_23_372 390666 391001 + 2.A.7.22.2
TC HRGMv2_1796_23 HRGMv2_1796_23_373 391001 391387 + 2.A.7.22.1
Gene ID: HRGMv2_1796_23_365
Type: TC
Location: 382434 - 382976 (-)
Gene ID: HRGMv2_1796_23_366
Type: STP
Location: 383295 - 383720 (+)
Gene ID: HRGMv2_1796_23_367
Type: STP
Location: 384011 - 385150 (+)
Gene ID: HRGMv2_1796_23_368
Type: CAZyme
Location: 385153 - 386136 (+)
Gene ID: HRGMv2_1796_23_369
Type: pfam
Location: 386133 - 388115 (+)
Gene ID: HRGMv2_1796_23_370
Type: pfam
Location: 388112 - 389014 (+)
Gene ID: HRGMv2_1796_23_371
Type: CAZyme
Location: 389011 - 390669 (+)
Gene ID: HRGMv2_1796_23_372
Type: TC
Location: 390666 - 391001 (+)
Gene ID: HRGMv2_1796_23_373
Type: TC
Location: 391001 - 391387 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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