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Cluster: HRGMv2_1796_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1796_23 HRGMv2_1796_23_160 141254 142474 - GT4
pfam HRGMv2_1796_23 HRGMv2_1796_23_161 142471 143751 - PS_pyruv_trans
TC HRGMv2_1796_23 HRGMv2_1796_23_162 143775 145253 - 2.A.66.2.7
TC HRGMv2_1796_23 HRGMv2_1796_23_163 145255 146649 - 9.B.18.1.1
pfam HRGMv2_1796_23 HRGMv2_1796_23_164 146704 148074 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam HRGMv2_1796_23 HRGMv2_1796_23_165 148202 149641 - NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
CAZyme HRGMv2_1796_23 HRGMv2_1796_23_166 149638 150864 - GT4
Gene ID: HRGMv2_1796_23_160
Type: CAZyme
Location: 141254 - 142474 (-)
Gene ID: HRGMv2_1796_23_161
Type: pfam
Location: 142471 - 143751 (-)
Gene ID: HRGMv2_1796_23_162
Type: TC
Location: 143775 - 145253 (-)
Gene ID: HRGMv2_1796_23_163
Type: TC
Location: 145255 - 146649 (-)
Gene ID: HRGMv2_1796_23_164
Type: pfam
Location: 146704 - 148074 (-)
Gene ID: HRGMv2_1796_23_165
Type: pfam
Location: 148202 - 149641 (-)
Gene ID: HRGMv2_1796_23_166
Type: CAZyme
Location: 149638 - 150864 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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