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Cluster: HRGMv2_1796_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1796_22 HRGMv2_1796_22_110 112944 115124 + AA2
pfam HRGMv2_1796_22 HRGMv2_1796_22_111 115210 116313 - Fe-ADH | Fe-ADH_2
pfam HRGMv2_1796_22 HRGMv2_1796_22_112 116326 116988 - TAL_FSA
TC HRGMv2_1796_22 HRGMv2_1796_22_113 117004 119505 - 4.A.2.1.10
TC HRGMv2_1796_22 HRGMv2_1796_22_114 119814 120893 + 4.A.2.1.10
TC HRGMv2_1796_22 HRGMv2_1796_22_115 120908 121228 + 4.A.2.1.10
pfam HRGMv2_1796_22 HRGMv2_1796_22_116 121332 123629 + Gly_radical | PFL-like
pfam HRGMv2_1796_22 HRGMv2_1796_22_117 123595 124473 + Radical_SAM | Fer4_12
TC HRGMv2_1796_22 HRGMv2_1796_22_118 124475 124831 + 4.A.2.1.10
Gene ID: HRGMv2_1796_22_110
Type: CAZyme
Location: 112944 - 115124 (+)
Gene ID: HRGMv2_1796_22_111
Type: pfam
Location: 115210 - 116313 (-)
Gene ID: HRGMv2_1796_22_112
Type: pfam
Location: 116326 - 116988 (-)
Gene ID: HRGMv2_1796_22_113
Type: TC
Location: 117004 - 119505 (-)
Gene ID: HRGMv2_1796_22_114
Type: TC
Location: 119814 - 120893 (+)
Gene ID: HRGMv2_1796_22_115
Type: TC
Location: 120908 - 121228 (+)
Gene ID: HRGMv2_1796_22_116
Type: pfam
Location: 121332 - 123629 (+)
Gene ID: HRGMv2_1796_22_117
Type: pfam
Location: 123595 - 124473 (+)
Gene ID: HRGMv2_1796_22_118
Type: TC
Location: 124475 - 124831 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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