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Cluster: HRGMv2_1796_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1796_8 HRGMv2_1796_8_264 287799 290891 + GH2
pfam HRGMv2_1796_8 HRGMv2_1796_8_265 290888 291337 + DUF386
TC HRGMv2_1796_8 HRGMv2_1796_8_266 291403 292836 + 2.A.3.7.4
CAZyme HRGMv2_1796_8 HRGMv2_1796_8_267 293049 294107 - GH130_4
CAZyme HRGMv2_1796_8 HRGMv2_1796_8_268 294091 295674 - GH13_31
TC HRGMv2_1796_8 HRGMv2_1796_8_269 295686 296513 - 3.A.1.1.36
TC HRGMv2_1796_8 HRGMv2_1796_8_270 296514 297380 - 3.A.1.1.35
Gene ID: HRGMv2_1796_8_264
Type: CAZyme
Location: 287799 - 290891 (+)
Gene ID: HRGMv2_1796_8_265
Type: pfam
Location: 290888 - 291337 (+)
Gene ID: HRGMv2_1796_8_266
Type: TC
Location: 291403 - 292836 (+)
Gene ID: HRGMv2_1796_8_267
Type: CAZyme
Location: 293049 - 294107 (-)
Gene ID: HRGMv2_1796_8_268
Type: CAZyme
Location: 294091 - 295674 (-)
Gene ID: HRGMv2_1796_8_269
Type: TC
Location: 295686 - 296513 (-)
Gene ID: HRGMv2_1796_8_270
Type: TC
Location: 296514 - 297380 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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