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Cluster: HRGMv2_1788_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1788_1 HRGMv2_1788_1_836 990146 991039 + 9.B.1.1.6
pfam HRGMv2_1788_1 HRGMv2_1788_1_837 991148 992167 + NeuB | SAF
pfam HRGMv2_1788_1 HRGMv2_1788_1_838 992272 993282 - Gp_dh_N | Gp_dh_C
CAZyme HRGMv2_1788_1 HRGMv2_1788_1_839 993910 996111 + GH77
CAZyme HRGMv2_1788_1 HRGMv2_1788_1_840 996129 998306 + GH13_9
CAZyme HRGMv2_1788_1 HRGMv2_1788_1_841 998460 1000637 + GH13_11
peptidase HRGMv2_1788_1 HRGMv2_1788_1_842 1000723 1002735 - S49.UPA
TC HRGMv2_1788_1 HRGMv2_1788_1_843 1002860 1003801 - 8.A.21.2.1
Gene ID: HRGMv2_1788_1_836
Type: TC
Location: 990146 - 991039 (+)
Gene ID: HRGMv2_1788_1_837
Type: pfam
Location: 991148 - 992167 (+)
Gene ID: HRGMv2_1788_1_838
Type: pfam
Location: 992272 - 993282 (-)
Gene ID: HRGMv2_1788_1_839
Type: CAZyme
Location: 993910 - 996111 (+)
Gene ID: HRGMv2_1788_1_840
Type: CAZyme
Location: 996129 - 998306 (+)
Gene ID: HRGMv2_1788_1_841
Type: CAZyme
Location: 998460 - 1000637 (+)
Gene ID: HRGMv2_1788_1_842
Type: peptidase
Location: 1000723 - 1002735 (-)
Gene ID: HRGMv2_1788_1_843
Type: TC
Location: 1002860 - 1003801 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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