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Cluster: HRGMv2_1783_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1783_10 HRGMv2_1783_10_54 55975 59067 + GH2
pfam HRGMv2_1783_10 HRGMv2_1783_10_55 59064 59513 + DUF386
TC HRGMv2_1783_10 HRGMv2_1783_10_56 59606 61039 + 2.A.3.7.4
TC HRGMv2_1783_10 HRGMv2_1783_10_57 61268 62701 + 2.A.3.7.4
NULL(UNKNOWN) HRGMv2_1783_10 HRGMv2_1783_10_58 62748 63806 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1783_10 HRGMv2_1783_10_59 63824 66172 + GH63
pfam HRGMv2_1783_10 HRGMv2_1783_10_60 66212 66508 - ABM
pfam HRGMv2_1783_10 HRGMv2_1783_10_61 66505 67392 - DeoC
TC HRGMv2_1783_10 HRGMv2_1783_10_62 67404 68405 - 3.A.1.2.8
TC HRGMv2_1783_10 HRGMv2_1783_10_63 68407 69399 - 3.A.1.2.8
TC HRGMv2_1783_10 HRGMv2_1783_10_64 69400 70434 - 3.A.1.2.8
TC HRGMv2_1783_10 HRGMv2_1783_10_65 70431 71918 - 3.A.1.2.8
Gene ID: HRGMv2_1783_10_54
Type: CAZyme
Location: 55975 - 59067 (+)
Gene ID: HRGMv2_1783_10_55
Type: pfam
Location: 59064 - 59513 (+)
Gene ID: HRGMv2_1783_10_56
Type: TC
Location: 59606 - 61039 (+)
Gene ID: HRGMv2_1783_10_57
Type: TC
Location: 61268 - 62701 (+)
Gene ID: HRGMv2_1783_10_58
Type:
Location: 62748 - 63806 (+)
Gene ID: HRGMv2_1783_10_59
Type: CAZyme
Location: 63824 - 66172 (+)
Gene ID: HRGMv2_1783_10_60
Type: pfam
Location: 66212 - 66508 (-)
Gene ID: HRGMv2_1783_10_61
Type: pfam
Location: 66505 - 67392 (-)
Gene ID: HRGMv2_1783_10_62
Type: TC
Location: 67404 - 68405 (-)
Gene ID: HRGMv2_1783_10_63
Type: TC
Location: 68407 - 69399 (-)
Gene ID: HRGMv2_1783_10_64
Type: TC
Location: 69400 - 70434 (-)
Gene ID: HRGMv2_1783_10_65
Type: TC
Location: 70431 - 71918 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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