PROTEIN: HRGMv2_1783_10_58
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Protein File & Metadata
Source:
HRGMv2_1783_10_58.pdb
Genome ID:
Protein ID:
HRGMv2_1783_10_58
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Protein Sequence
MKKNNLIYGA LAALAFCTPA VAADVAHPAE HDDMKTPELS ATSYRFYGEL GVGGYMDLEG 60 EDKHKYSDGT YIEGGLEIKH GSWFGLIYGE GWTVQADRQG NAWVPDHGWG GFEGGINRLY 120 GGYKTDSSTE IMLSLRQDSS LDDLQWWGDF TPDLGYVVPN TRDIMYALKV QNLAGDFRYS 180 VTATPAGHHD EGKAWLHFGK YDRYDDKYTY PAMVNGYVQY DIAEKVTWMN GLELTDGTGQ 240 LLLTGILTPN LAARAWHHTG RARGKDVPGT ETGFMASAMY EALKGVYLST AYSYAKHRPD 300 RAAEETTSFM QFGVWYEYGG GRFATAADSR FYMKNASGDP SDQVFLMQYF YW 352
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 1 | 352 | 4 | 356 | 0.956 |
0.9698 |
| AF-P37432-F1-model_v4 | 28 | 352 | 16 | 363 | 0.7347 |
0.8201 |
| AF-P43839-F1-model_v4 | 32 | 352 | 17 | 359 | 0.7204 |
0.8098 |
| AF-Q5F5V7-F1-model_v4 | 40 | 352 | 17 | 348 | 0.6917 |
0.7836 |
| AF-Q9I2D1-F1-model_v4 | 26 | 352 | 21 | 399 | 0.6846 |
0.7928 |
| AF-Q9SXB7-F1-model_v4 | 40 | 352 | 78 | 424 | 0.6143 |
0.7608 |
| AF-Q8ZMK7-F1-model_v4 | 2 | 352 | 14 | 456 | 0.6129 |
0.7032 |
| AF-A0A0H3GUW9-F1-model_v4 | 3 | 352 | 24 | 447 | 0.6018 |
0.6861 |
| AF-Q9I0X7-F1-model_v4 | 22 | 352 | 11 | 445 | 0.5982 |
0.7234 |
| AF-Q9I6U5-F1-model_v4 | 23 | 352 | 1 | 449 | 0.5925 |
0.7212 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5o78-assembly1.cif.gz_C | 40 | 352 | 1 | 331 | 0.7508 |
0.8305 |
| 3nsg-assembly1.cif.gz_C | 34 | 352 | 1 | 341 | 0.7505 |
0.8276 |
| 4kr4-assembly1.cif.gz_B | 34 | 352 | 1 | 340 | 0.7502 |
0.826 |
| 4kra-assembly1.cif.gz_B | 34 | 352 | 1 | 340 | 0.7492 |
0.8253 |
| 4kr8-assembly1.cif.gz_B | 34 | 352 | 1 | 340 | 0.7489 |
0.8245 |
| 6ehe-assembly1.cif.gz_A | 40 | 352 | 1 | 302 | 0.7478 |
0.8153 |
| 4kra-assembly1.cif.gz_C | 34 | 352 | 1 | 337 | 0.7472 |
0.8199 |
| 6ene-assembly1.cif.gz_C | 34 | 352 | 1 | 329 | 0.7459 |
0.8098 |
| 5o77-assembly1.cif.gz_A | 34 | 352 | 1 | 337 | 0.7457 |
0.8185 |
| 4kr4-assembly1.cif.gz_C | 34 | 352 | 1 | 334 | 0.7441 |
0.813 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 1 | 352 | 4 | 356 | 0.956 |
0.9698 |
| AF-Q52581-F1-model_v4 | 23 | 352 | 2 | 341 | 0.7431 |
0.7933 |
| AF-P29739-F1-model_v4 | 30 | 352 | 16 | 326 | 0.7361 |
0.8116 |
| AF-Q56113-F1-model_v4 | 28 | 352 | 13 | 363 | 0.7355 |
0.8207 |
| AF-A0A0H3N9T8-F1-model_v4 | 28 | 352 | 13 | 363 | 0.7347 |
0.82 |
| AF-P37432-F1-model_v4 | 28 | 352 | 16 | 363 | 0.7347 |
0.8201 |
| AF-Q48221-F1-model_v4 | 30 | 352 | 16 | 353 | 0.7268 |
0.8063 |
| AF-O54340-F1-model_v4 | 31 | 352 | 16 | 343 | 0.7255 |
0.7943 |
| AF-Q8K9I8-F1-model_v4 | 22 | 352 | 2 | 369 | 0.724 |
0.8022 |
| AF-Q8DBX0-F1-model_v4 | 24 | 352 | 6 | 340 | 0.7235 |
0.7754 |