Cluster: HRGMv2_1754_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1754
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1754_11 | HRGMv2_1754_11_45 | 43393 | 44445 | - | GT28 |
| TC | HRGMv2_1754_11 | HRGMv2_1754_11_46 | 44454 | 45638 | - | 2.A.103.1.1 |
| pfam | HRGMv2_1754_11 | HRGMv2_1754_11_47 | 45654 | 46967 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1754_11 | HRGMv2_1754_11_48 | 47030 | 48112 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1754_11_45
Type: CAZyme
Location: 43393 - 44445 (-)
Type: CAZyme
Location: 43393 - 44445 (-)
Gene ID: HRGMv2_1754_11_46
Type: TC
Location: 44454 - 45638 (-)
Type: TC
Location: 44454 - 45638 (-)
Gene ID: HRGMv2_1754_11_47
Type: pfam
Location: 45654 - 46967 (-)
Type: pfam
Location: 45654 - 46967 (-)
Gene ID: HRGMv2_1754_11_48
Type: TC
Location: 47030 - 48112 (-)
Type: TC
Location: 47030 - 48112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.