Cluster: HRGMv2_1753_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1753
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1753_4 | HRGMv2_1753_4_144 | 147511 | 148680 | + | GT19 |
| pfam | HRGMv2_1753_4 | HRGMv2_1753_4_145 | 148673 | 149275 | + | RNase_HII |
| TC | HRGMv2_1753_4 | HRGMv2_1753_4_146 | 149311 | 151164 | + | 2.A.47.4.8 |
Gene ID: HRGMv2_1753_4_144
Type: CAZyme
Location: 147511 - 148680 (+)
Type: CAZyme
Location: 147511 - 148680 (+)
Gene ID: HRGMv2_1753_4_145
Type: pfam
Location: 148673 - 149275 (+)
Type: pfam
Location: 148673 - 149275 (+)
Gene ID: HRGMv2_1753_4_146
Type: TC
Location: 149311 - 151164 (+)
Type: TC
Location: 149311 - 151164 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp014931275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.