Cluster: HRGMv2_1753_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1753
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1753_2 | HRGMv2_1753_2_74 | 77582 | 79036 | + | GH32 |
| pfam | HRGMv2_1753_2 | HRGMv2_1753_2_75 | 79046 | 79663 | + | Y_phosphatase | DSPc | Y_phosphatase2 | Y_phosphatase3 | PTP-NADK | Tc-R-P |
| TC | HRGMv2_1753_2 | HRGMv2_1753_2_76 | 79735 | 80907 | + | 2.A.1.20.4 |
Gene ID: HRGMv2_1753_2_74
Type: CAZyme
Location: 77582 - 79036 (+)
Type: CAZyme
Location: 77582 - 79036 (+)
Gene ID: HRGMv2_1753_2_75
Type: pfam
Location: 79046 - 79663 (+)
Type: pfam
Location: 79046 - 79663 (+)
Gene ID: HRGMv2_1753_2_76
Type: TC
Location: 79735 - 80907 (+)
Type: TC
Location: 79735 - 80907 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp014931275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.