Cluster: HRGMv2_1753_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1753
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1753_10 | HRGMv2_1753_10_86 | 63981 | 65198 | + | CBM50 |
| pfam | HRGMv2_1753_10 | HRGMv2_1753_10_87 | 65294 | 67009 | + | tRNA-synt_2b | HGTP_anticodon | tRNA_edit |
| TC | HRGMv2_1753_10 | HRGMv2_1753_10_88 | 67118 | 68554 | - | 9.B.24.1.2 |
Gene ID: HRGMv2_1753_10_86
Type: CAZyme
Location: 63981 - 65198 (+)
Type: CAZyme
Location: 63981 - 65198 (+)
Gene ID: HRGMv2_1753_10_87
Type: pfam
Location: 65294 - 67009 (+)
Type: pfam
Location: 65294 - 67009 (+)
Gene ID: HRGMv2_1753_10_88
Type: TC
Location: 67118 - 68554 (-)
Type: TC
Location: 67118 - 68554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp014931275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.