Cluster: HRGMv2_1753_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1753
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1753_7 | HRGMv2_1753_7_122 | 127023 | 128324 | - | 2.A.26.1.1 |
| TC | HRGMv2_1753_7 | HRGMv2_1753_7_123 | 128533 | 129720 | + | 2.A.33.1.2 |
| CAZyme | HRGMv2_1753_7 | HRGMv2_1753_7_124 | 129729 | 131261 | + | GT2 |
| pfam | HRGMv2_1753_7 | HRGMv2_1753_7_125 | 131353 | 132492 | - | DUF2827 |
| TC | HRGMv2_1753_7 | HRGMv2_1753_7_126 | 132628 | 133848 | - | 1.B.40.1.5 |
Gene ID: HRGMv2_1753_7_122
Type: TC
Location: 127023 - 128324 (-)
Type: TC
Location: 127023 - 128324 (-)
Gene ID: HRGMv2_1753_7_123
Type: TC
Location: 128533 - 129720 (+)
Type: TC
Location: 128533 - 129720 (+)
Gene ID: HRGMv2_1753_7_124
Type: CAZyme
Location: 129729 - 131261 (+)
Type: CAZyme
Location: 129729 - 131261 (+)
Gene ID: HRGMv2_1753_7_125
Type: pfam
Location: 131353 - 132492 (-)
Type: pfam
Location: 131353 - 132492 (-)
Gene ID: HRGMv2_1753_7_126
Type: TC
Location: 132628 - 133848 (-)
Type: TC
Location: 132628 - 133848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp014931275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1753_7_125 | vegetarian > vegan | 1.06556 | 0.03611 |