Cluster: HRGMv2_1753_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1753
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1753_6 | HRGMv2_1753_6_20 | 17917 | 19935 | - | GT41 |
| pfam | HRGMv2_1753_6 | HRGMv2_1753_6_21 | 19975 | 21312 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_1753_6 | HRGMv2_1753_6_22 | 21478 | 22194 | + | 9.B.20.2.2 |
Gene ID: HRGMv2_1753_6_20
Type: CAZyme
Location: 17917 - 19935 (-)
Type: CAZyme
Location: 17917 - 19935 (-)
Gene ID: HRGMv2_1753_6_21
Type: pfam
Location: 19975 - 21312 (-)
Type: pfam
Location: 19975 - 21312 (-)
Gene ID: HRGMv2_1753_6_22
Type: TC
Location: 21478 - 22194 (+)
Type: TC
Location: 21478 - 22194 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp014931275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.