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Cluster: HRGMv2_1753_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1753_5 HRGMv2_1753_5_147 160093 160764 - 3.A.1.122.8
pfam HRGMv2_1753_5 HRGMv2_1753_5_148 160766 161899 - FtsX | MacB_PCD
TC HRGMv2_1753_5 HRGMv2_1753_5_149 161886 163226 - 3.A.1.122.8
pfam HRGMv2_1753_5 HRGMv2_1753_5_150 163226 164620 - YHS | FtrD-like
TC HRGMv2_1753_5 HRGMv2_1753_5_151 164736 165257 - 2.A.108.2.10
TC HRGMv2_1753_5 HRGMv2_1753_5_152 165286 167190 - 2.A.108.2.10
CAZyme HRGMv2_1753_5 HRGMv2_1753_5_153 167410 169809 - GT51
Gene ID: HRGMv2_1753_5_147
Type: TC
Location: 160093 - 160764 (-)
Gene ID: HRGMv2_1753_5_148
Type: pfam
Location: 160766 - 161899 (-)
Gene ID: HRGMv2_1753_5_149
Type: TC
Location: 161886 - 163226 (-)
Gene ID: HRGMv2_1753_5_150
Type: pfam
Location: 163226 - 164620 (-)
Gene ID: HRGMv2_1753_5_151
Type: TC
Location: 164736 - 165257 (-)
Gene ID: HRGMv2_1753_5_152
Type: TC
Location: 165286 - 167190 (-)
Gene ID: HRGMv2_1753_5_153
Type: CAZyme
Location: 167410 - 169809 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1753_5_150 vegetarian > vegan 1.90970 0.02034
HRGMv2_1753_5_152 vegetarian > vegan 1.12190 0.03611

🧭 Explore Read Mapping of CGC

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