Cluster: HRGMv2_1752_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1752
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1752_9 | HRGMv2_1752_9_27 | 28056 | 29138 | + | 9.B.146.1.6 |
| pfam | HRGMv2_1752_9 | HRGMv2_1752_9_28 | 29201 | 30514 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1752_9 | HRGMv2_1752_9_29 | 30530 | 31714 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_1752_9 | HRGMv2_1752_9_30 | 31723 | 32775 | + | GT28 |
Gene ID: HRGMv2_1752_9_27
Type: TC
Location: 28056 - 29138 (+)
Type: TC
Location: 28056 - 29138 (+)
Gene ID: HRGMv2_1752_9_28
Type: pfam
Location: 29201 - 30514 (+)
Type: pfam
Location: 29201 - 30514 (+)
Gene ID: HRGMv2_1752_9_29
Type: TC
Location: 30530 - 31714 (+)
Type: TC
Location: 30530 - 31714 (+)
Gene ID: HRGMv2_1752_9_30
Type: CAZyme
Location: 31723 - 32775 (+)
Type: CAZyme
Location: 31723 - 32775 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.